Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826824.1_cds_XP_016502828.1_16425
CDS Infomation

[gene=LOC107820973] [db_xref=GeneID:107820973] [protein=cyclic nucleotide-gated ion channel 2-like isoform X2] [protein_id=XP_016502828.1] [location=complement(join(69536..70021,70291..70377,70477..70713,70797..70908,71334..71650,72075..72290,74087..74723,92087..92112))] [gbkey=CDS]
Sequence

ATGGCTCATTTTCTCTCAAACTCCAGGTGGTTCGGCATATTCCGACGAAGATCAGTTCAA
CCTGACAACAGCGACGACAACGAAGATGACAGCAACCCAATCTCAAACTCCATTGAATGT
TATGCATGCACTCAAGTTGGCGTCCCAGTTTTCCACTCCACTAGTTGCGACCAAGCTAAC
CCACCGGAGTGGGAAGCTTCAGCCGGTTCCTCGCTAGTTCCAATTCAGAACCGGACTAAT
AATTCCAGAACCGGAAAATCCCGGTCCAGTCACAACCGGCATCCGTCGGGTCCATTCGGA
AGTGTGTTAGACCCTCGAAGCAAGCGCGTGCAGAGATGGAATCGATTCATTTTGTTGGCA
CGTGGCATGGCCTTAGCCGTTGATCCTCTCTTCTTTTACGCCTTATCCATCGGCCGTGGT
GGATCGCCGTGCTTGTACATGGACGGCGGACTTGCGGCTATCGTCACGGTGATACGGACT
TGCCTCGACGCCGTACACCTCCTCCACTTGTGGCTGCAGTTTCGGTTGGCGTACGTGTCG
AGAGAGTCGCTAGTTGTTGGGTGTGGGAAACTCGTGTGGGACGCGCGTGCGATTGCTGCT
CACTATGTTCGGTCCGTTAAAGGATTCTGGTTCGATACTTTTGTCGTCCTACCCGTCCCT
CAGGTTGTATTTTGGCTGGTGGTTCCAAAACTAATAAGAGAAGAGCAGATCAAGCTTATA
ATGACAATCCTTCTACTAATGTTCTTGTTCCAGTTCCTCCCCAAAGTATATCACAGCATA
AGCTTAATGAGAAGAATGCAAAAGGTTACTGGATATATTTTTGGTACCATTTGGTGGGGA
TTTGGCCTTAATCTCATTGCTTATTTTATTGCTTCTCATGTTGCTGGGGGTTGCTGGTAT
GTACTATCTATACAAAGAGTAGCTTCATGTCTAAGGCAGCAGTGTGAACAGAAAGCTTCT
TGTAATCTGTCTTTGTCATGCTCAGAGGAGGTTTGTTATCAGTTTCTATTGCCAACAGGA
ACTGTGGGAAATCCATGTGCTGGGAACTCAACAACAGTGATGAGGAAGCCACTGTGTTTA
GATGTTAATGGACCATTTCCATATGGAATATACAAATGGGCTCTACCTGTTGTTTCTAGT
AGGTCTGTCACTGTGAAGATTCTTTATCCCATCTTTTGGGGATTGATGACCCTTAGTACA
TTTGGCAATGACTTAGAACCGACGAGTCATTGGCTAGAAGTTATCTTCAGTATATGCCTT
GTGCTTAGTGGATTGATGCTCTTCACTCTGTTGATAGGGAATATCCAGGTGTTTTTACAC
GCGGTGATGGCAAAGAAGAGAAAAATGCAATTGAGGTGCAGGGATATGGAATGGTGGATG
AAGAGGAGACAATTACCATCACAATTGAGACAAAGAGTTCGCCACTTTGAACACCAGAGA
TGGGCTATGATGGGTGGAGAAGATGAGATGGAACTCGTAAAAGACTTGCCAGAAGGACTT
CGAAGGGATATCAAACGCTTTCTTTGCCTTGATCTTATTAAAAAGGTTCCTCTGTTCCAT
AGTTTGGATGATCTAATTCTAGACAACATCTGTGATCGAGTTAAGCCATTAGTCTTCTCC
AAAGATGAGAAGATCATTAGAGAAGGAGATCCCGTGCACCGGGTGGTGTTCATTGTTCGT
GGGCGAGTAAAAAGTAGCCAAAACCTCAGTAAAGGGATGGTCGCAACGAGCATACTTGAG
CCTGGAGGCTTCTTTGGAGATGAGCTTCTTTCCTGGTGCTTACGCCGTCCCTTCATTGAC
AGACTTCCAGCTTCTTCAGCAACCTTTACTTGCATAGAATCCACAGAAGCATTTGGCTTA
GATGCAAACCATCTACGATTTATCACAGATCACTTCAGATACAAATTTGCAAACGAGAGG
CTTAAGCGAACAGCAAGGTATTATTCATCCAATTGGAGAACATGGGCTGCTGTGAATATA
CAGTTAGCTTGGCGTCGTTACATGGTGAGGACAAGCCGTCCTGTGAATCAGGTAACGGAG
AATGGGGATAGTGATCATCGCCTTCGAAAGTATGCTGCAATGTTCTTGTCAATCAGGCCA
CATGATCATCTTGAGTAG

Peptide Sequence

PEP ID

XP_016502828.1
PEP Infomation

PREDICTED: cyclic nucleotide-gated ion channel 2-like isoform X2 [Nicotiana tabacum]
Sequence

MAHFLSNSRWFGIFRRRSVQPDNSDDNEDDSNPISNSIECYACTQVGVPVFHSTSCDQAN
PPEWEASAGSSLVPIQNRTNNSRTGKSRSSHNRHPSGPFGSVLDPRSKRVQRWNRFILLA
RGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVIRTCLDAVHLLHLWLQFRLAYVS
RESLVVGCGKLVWDARAIAAHYVRSVKGFWFDTFVVLPVPQVVFWLVVPKLIREEQIKLI
MTILLLMFLFQFLPKVYHSISLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWY
VLSIQRVASCLRQQCEQKASCNLSLSCSEEVCYQFLLPTGTVGNPCAGNSTTVMRKPLCL
DVNGPFPYGIYKWALPVVSSRSVTVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIFSICL
VLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSQLRQRVRHFEHQR
WAMMGGEDEMELVKDLPEGLRRDIKRFLCLDLIKKVPLFHSLDDLILDNICDRVKPLVFS
KDEKIIREGDPVHRVVFIVRGRVKSSQNLSKGMVATSILEPGGFFGDELLSWCLRRPFID
RLPASSATFTCIESTEAFGLDANHLRFITDHFRYKFANERLKRTARYYSSNWRTWAAVNI
QLAWRRYMVRTSRPVNQVTENGDSDHRLRKYAAMFLSIRPHDHLE

Transcript Sequence

Gene sequence data has not been registered.